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Journal of Virology, July 2007, p. 6869-6878, Vol. 81, No. 13
0022-538X/07/$08.00+0 doi:10.1128/JVI.00077-07
Copyright © 2007, American Society for Microbiology. All Rights Reserved.

José F. Rodríguez,2
Nuria Verdaguer,3
Damiá Garriga,3
Carmen San Martín,1
Javier A. Velázquez-Muriel,1
Benes L. Trus,4
José L. Carrascosa,1 and
José R. Castón1*
Departments of Structure of Macromolecules,1 Molecular and Cellular Biology, Centro Nacional de Biotecnología/CSIC, Cantoblanco, 28049 Madrid, Spain,2 Institut de Biologia Molecular de Barcelona/CSIC, Parc Científic de Barcelona, Josep Samitier 1-5, 08028 Barcelona, Spain,3 Imaging Sciences Laboratory, CIT, NIH, Bethesda, Maryland 20892-56244
Received 11 January 2007/ Accepted 6 April 2007
Infectious bursal disease virus (IBDV), a double-stranded RNA (dsRNA) virus belonging to the Birnaviridae family, is an economically important avian pathogen. The IBDV capsid is based on a single-shelled T=13 lattice, and the only structural subunits are VP2 trimers. During capsid assembly, VP2 is synthesized as a protein precursor, called pVP2, whose 71-residue C-terminal end is proteolytically processed. The conformational flexibility of pVP2 is due to an amphipathic
-helix located at its C-terminal end. VP3, the other IBDV major structural protein that accomplishes numerous roles during the viral cycle, acts as a scaffolding protein required for assembly control. Here we address the molecular mechanism that defines the multimeric state of the capsid protein as hexamers or pentamers. We used a combination of three-dimensional cryo-electron microscopy maps at or close to subnanometer resolution with atomic models. Our studies suggest that the key polypeptide element, the C-terminal amphipathic
-helix, which acts as a transient conformational switch, is bound to the flexible VP2 C-terminal end. In addition, capsid protein oligomerization is also controlled by the progressive trimming of its C-terminal domain. The coordination of these molecular events correlates viral capsid assembly with different conformations of the amphipathic
-helix in the precursor capsid, as a five-
-helix bundle at the pentamers or an open star-like conformation at the hexamers. These results, reminiscent of the assembly pathway of positive single-stranded RNA viruses, such as nodavirus and tetravirus, add new insights into the evolutionary relationships of dsRNA viruses.
Published ahead of print on 18 April 2007.
Present address: Cancer Research UK, Clare Hall Laboratories, South Mimms, Herts EN6 3LD, United Kingdom.
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