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Journal of Virology, April 2006, p. 4179-4182, Vol. 80, No. 8
0022-538X/06/$08.00+0 doi:10.1128/JVI.80.8.4179-4182.2006
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts 02115,1 Division of Immunology, New England Primate Research Center, Harvard Medical School, Southborough, Massachusetts 01772,2 Partners AIDS Research Center and Massachusetts General Hospital, Harvard Medical School, Charlestown, Massachusetts 021293
Received 27 October 2005/ Accepted 31 January 2006
A pathogenic isolate of rhesus cytomegalovirus (rhCMV 180.92) was cloned, sequenced, and annotated. Comparisons with the published rhCMV 68.1 genome revealed 8 open reading frames (ORFs) in isolate 180.92 that are absent in 68.1, 10 ORFs in 68.1 that are absent in 180.92, and 34 additional ORFs that were not previously annotated. Most of the differences appear to be due to genetic rearrangements in both isolates from a region that is frequently altered in human CMV (hCMV) during in vitro passage. These results indicate that the rhCMV ORF repertoire is larger than previously recognized. Like hCMV, understanding of the complete coding capacity of rhCMV is complicated by genomic instability and may require comparisons with additional isolates in vitro and in vivo.
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