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Journal of Virology, March 2001, p. 2957-2971, Vol. 75, No. 6
Laboratory of Molecular Microbiology,
National Institute of Allergy and Infectious Diseases, Bethesda,
Maryland 20892
Received 21 June 2000/Accepted 27 December 2000
The Rev regulatory protein of human immunodeficiency virus (HIV)
facilitates the nuclear export of unspliced and partially spliced HIV
RNAs. Using a Rev:MS2 phage coat protein fusion that could be targeted
to bind and activate the Rev-responsive element (RRE) RNA or
heterologous MS2 phage operator RNA, we analyzed the role(s) of the
arginine-rich RNA binding domain in RNA binding and transactivation.
The arginine-rich domain could be functionally replaced by a stretch of
nine arginines. However, polyarginine substitutions expanded the RNA
binding specificity of the resultant mutant Rev protein. Polyarginine
insertions in place of residues 24 to 60 that excised the RNA binding
and oligomerization domains of Rev preserved the activation for MS2
RNA, but not for the RRE. A nine-arginine insertion outside of the
natural context of the Rev nuclear localization signal domain was
incompatible with activation of either RNA target. Insertions of fewer
than eight arginines impaired RRE activation. Interrupted lysine
clusters and disruption of the arginine stretch with lysine or neutral
residues resulted in a similar phenotype. Some of these mutants with a
null phenotype for RRE activated the heterologous MS2 RNA target. Under
steady-state conditions, mutants that preserved the Rev response for
RRE RNA localized to the nuclei; those with poor or no Rev response
accumulated mostly in the cytoplasm. Many of the cytoplasmically
resident derivatives became nuclear when leptomycin B (LMB) treatment
inhibited nuclear export of nuclear export signal-containing proteins.
Mutants that had a null activation potential for either RNA target were particularly resistant to LMB treatment. Abbreviated nuclear residence times and differences in RRE binding affinity may have compromised their activation potential for RRE. High-affinity binding to MS2 RNA
through the intact coat protein was sufficient to overcome the short
nuclear residence times and to facilitate MS2 activation by some derivatives.
0022-538X/01/$04.00+0 DOI: 10.1128/JVI.75.6.2957-2971.2001
Exchange of the Basic Domain of Human Immunodeficiency Virus Type
1 Rev for a Polyarginine Stretch Expands the RNA Binding Specificity,
and a Minimal Arginine Cluster Is Required for Optimal RRE RNA
Binding Affinity, Nuclear Accumulation, and
trans-Activation
*
Corresponding author. Mailing address: LMM, NIAID,
Bldg. 10, Rm. 6A05, National Institutes of Health, Bethesda, MD
20892-1576. Phone: (301) 496-6359. Fax: (301) 402-4122. E-mail:
aradhana{at}helix.nih.gov.
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