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Journal of Virology, September 2000, p. 8390-8401, Vol. 74, No. 18
Departments of
Medicine,1 Microbiology and
Immunology,2 Biochemistry and
Biophysics,3 and the Cancer
Center,4 University of Rochester School of
Medicine and Dentistry, Rochester, New York 14642
Received 4 January 2000/Accepted 7 June 2000
Three mutants of human immunodeficiency virus type 1 (HIV-1)
reverse transcriptase (V106A, V179D, and Y181C), which occur in
clinical isolates and confer resistance to nonnucleoside reverse transcriptase inhibitors (NNRTIs), were analyzed for RNA- and DNA-dependent DNA polymerization and RNase H cleavage. All mutants demonstrated processivities of polymerization that were
indistinguishable from wild-type enzyme under conditions in which
deoxynucleoside triphosphates were not limiting. The V106A reverse
transcriptase demonstrated a three- to fourfold slowing of both DNA
3'-end-directed and RNA 5'-end-directed RNase H cleavage relative to
both wild-type and V179D enzymes, similar to what was observed for
P236L in a previously published study (P. Gerondelis et al., J. Virol. 73:5803-5813, 1999). In contrast, the Y181C reverse
transcriptase demonstrated a selective acceleration of the secondary
RNase H cleavage step during both modes of RNase H cleavage. The
relative replication fitness of these mutants in H9 cells was assessed
in parallel infections as well as in growth competition experiments. Of
the NNRTI-resistant mutants, V179D was more fit than Y181C, and both of
these mutants were more fit than V106A, which demonstrated the greatest
reduction in RNase H cleavage. These findings, in combination with
results from previous work, suggest that abnormalities in RNase H
cleavage are a common characteristic of HIV-1 mutants resistant to
NNRTIs and that combined reductions in the rates of DNA 3'-end- and RNA
5'-end-directed cleavages are associated with significant reductions in
the replication fitness of HIV-1.
0022-538X/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Mutants of Human Immunodeficiency Virus Type 1 (HIV-1) Reverse Transcriptase Resistant to Nonnucleoside Reverse
Transcriptase Inhibitors Demonstrate Altered Rates of RNase H
Cleavage That Correlate with HIV-1 Replication Fitness in
Cell Culture
*
Corresponding author. Mailing address: University of
Rochester Infectious Diseases Unit, 601 Elmwood Ave., Box 689, Rochester, NY 14642. Phone: (716) 275-4764. Fax: (716) 442-9328. E-mail: Lisa_Demeter{at}urmc.rochester.edu.
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