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Journal of Virology, October 1999, p. 8027-8034, Vol. 73, No. 10
0022-538X/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Effects of Stuffer DNA on Transgene Expression from
Helper-Dependent Adenovirus Vectors
Robin J.
Parks,1,2,
Jonathan L.
Bramson,2
Yonghong
Wan,2
Christina L.
Addison,1,
and
Frank
L.
Graham1,2,*
Departments of
Biology1 and
Pathology,2 McMaster University,
Hamilton, Ontario L8S 4K1, Canada
Received 16 February 1999/Accepted 2 July 1999
We have analyzed transgene (lacZ) expression from a
first-generation adenovirus (Ad) vector in comparison to
helper-dependent (hd) Ads deleted for various portions of the viral
coding sequences and generated by using the Cre/loxP
helper-dependent system (R. J. Parks et al., Proc. Natl. Acad.
Sci. USA 93:13565-13570, 1996). An hd vector deleted for approximately
70% of the Ad genome (AdRP1001) provided levels and durations of
transgene expression similar to those of a control first generation Ad
vector containing an identical expression cassette. Deletion of all Ad
sequences from the hdAd and replacement with a ~22-kb fragment of
lambda DNA resulted in a decrease in the level and duration of
lacZ expression which could not be reversed by the
inclusion of a matrix attachment region. However, substitution of the
lambda stuffer in the fully deleted hdAd with sequences from the human
hypoxanthine-guanine phosphoribosyltransferase gene resulted in
significantly improved transgene expression. In vitro assays for
cytotoxic T lymphocytes (CTL) directed against putative peptides
encoded by the vector backbone showed that, although CTL were generated
against the vector containing the lambda DNA, no such CTL were
generated against the vector containing the hypoxanthine-guanine
phosphoribosyltransferase (HPRT) sequences. Surprisingly, the rate of
loss of the HPRT- and lambda-containing vectors from mouse liver was
similar, despite the differences in expression kinetics, indicating
that the lambda stuffer-directed CTL were inefficient at eliminating
the transduced cells. Thus, the nature of the DNA backbone of hdAds can
have important effects on the functioning of the vector. Since most fully deleted vectors require "stuffer" DNA as part of the vector backbone to maintain optimum vector size, these observations must be
taken into account in the design of hdAd vectors.
*
Corresponding author. Mailing address: Department of
Biology, McMaster University, 1280 Main St., West, LSB-430,
Hamilton, Ontario L85 4K1, Canada. Phone: (905) 525-9140, ext.
23545. Fax: (905) 521-2955. E-mail: graham{at}mcmaster.ca.

Present address: Centre for Molecular Medicine, Ottawa Hospital
Research Institute, Ottawa, Ontario K1H 8L6,
Canada.

Present address: Department of Internal Medicine, University of
Michigan Medical Center, Ann Arbor, MI 48109-0360.
Journal of Virology, October 1999, p. 8027-8034, Vol. 73, No. 10
0022-538X/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
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