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J Virol, June 1998, p. 4989-4996, Vol. 72, No. 6
The David Axelrod Institute,
Received 2 January 1998/Accepted 18 March 1998
The mechanisms of action and regulation of the human
cytomegalovirus (HCMV) lytic-phase DNA replicator, oriLyt,
which spans more than 2 kbp in a structurally complex region near the
middle of the unique long region (UL), are not understood.
Because oriLyt is thought to be essential for promoting
initiation of lytic DNA synthesis and may participate in regulating the
switch between lytic and latent phases, we undertook a mutational study
to better define its sequence requirements. Kanr gene
cassette insertions located an oriLyt core region between nucleotides (nt) 91751 and 93299 that is necessary but not sufficient for replicator activity in transient assays. In contrast, insertions into auxiliary regions flanking either side of this core
0022-538X/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Human Cytomegalovirus oriLyt
Sequence Requirements
also required
for significant replicator activity
had little effect. To search for
essential components within the core region, we made a series of
overlapping, roughly 200-bp deletions, and qualitatively and
quantitatively assessed the abilities of the resulting constructs to
mediate replication. All but one of these deletions produced a
significant (i.e., greater than twofold) loss of activity, arguing that
sequences across this entire region contribute to replicator function.
However, two particularly critical segments separated by a dispensable
region, here called essential regions I and II, were identified. Within
essential region I, which overlaps the previously identified early
transcript SRT, two adjacent but nonoverlapping, roughly 200-bp
deletions abolished detectable replication. No single element or motif
from the left half of essential region I was found to be essential.
Thus, essential region I probably promotes replication through the
cooperation of multiple elements. However, four small deletions in the
right half of essential region I, which included or lay adjacent to the
conserved 31-nt oligopyrimidine tract (referred to as the Y block),
abolished or virtually abolished oriLyt activity. Together,
these results identify candidate oriLyt sequences within
which molecular interactions essential for initiation of
oriLyt-mediated DNA synthesis are likely to occur.
*
Corresponding author. Mailing address: The David
Axelrod Institute, Wadsworth Center for Laboratories and Research, and
Department of Biomedical Sciences, P.O. Box 22002, State University of
New York at Albany, Albany, NY 12201-2002. Phone: (518) 474-8969. Fax:
(518) 474-3181. E-mail: anders{at}wadsworth.org.
J Virol, June 1998, p. 4989-4996, Vol. 72, No. 6
0022-538X/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
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